Jeong-Yeol Yoon

Chapters

• Kaarj, K., & Yoon, J. (2023). Loop-Mediated Isothermal Amplification on Paper Microfluidic Chips for Highly Sensitive and Specific Zika Virus Detection Using Smartphone. In Clinical Applications of Nucleic Acid Amplification(pp 307-323). Humana Press. doi:https://doi.org/10.1007/978-1-0716-2950-5_18
• Dieckhaus, L., Park, T. S., & Yoon, J. (2021). Smartphone Based Paper Microfluidic Immunoassay of Salmonella and E. coli. In Salmonella: Methods and Protocols, Third Edition(pp 83-101). New York: Springer. doi:https://doi.org/10.1007/978-1-0716-0791-6_9
• Fronczek, C. F., & Yoon, J. (2016). Detection of Foodborne Pathogens Using Biosensors. In Antimicrobial Food Packaging(pp 153-166). Academic Press (Elsevier). doi:10.1016/B978-0-12-800723-5.00012-7
• Harshman, D. K., & Yoon, J. (2016). Wire-Guided Droplet Manipulation for Molecular Biology. In Microfluidic Methods for Molecular Biology(pp 235-252). Springer. doi:10.1007/978-3-319-30019-1_12
• Liang, P., Park, T. S., & Yoon, J. (2016). Light Scattering Based Detection of Food Pathogens. In Light Scattering Technology for Food Property, Quality and Safety Assessment(pp 429-444). Taylor & Francis. doi:10.1201/b20220-17

Journals/Publications

• Kim, S., Sosnowski, K., Hwang, D. S., & Yoon, J. (2024). Smartphone-Based Microalgae Monitoring Platform Using Machine Learning. ACS ES&T Engineering, 4(1), 186-195. doi:https://doi.org/10.1021/acsestengg.3c00261
• Breshears, L. E., Mata-Robles, S., Tang, Y., Baker, J. C., Reynolds, K. A., & Yoon, J. (2023). Rapid, sensitive detection of PFOA with smartphone-based flow rate analysis utilizing competitive molecular interactions during capillary action. Journal of Hazardous Materials, 446, 130699. doi:https://doi.org/10.1016/j.jhazmat.2022.130699
• Chung, S., Loh, A., Jennings, C. M., Sosnowski, K., Ha, S. Y., Yim, U. H., & Yoon, J. (2023). Capillary flow velocity profile analysis on paper-based microfluidic chips for screening oil types using machine learning. Journal of Hazardous Materials, 447, 130806. doi:https://doi.org/10.1016/j.jhazmat.2023.130806
• Hertenstein, T., Tang, Y., Day, A. S., Reynolds, J., Viboolmate, P. V., & Yoon, J. (2023). Rapid and sensitive detection of miRNA via light scatter-aided emulsion-based isothermal amplification using a custom low-cost device. Biosensors and Bioelectronics, 237, 115444. doi:https://doi.org/10.1016/j.bios.2023.115444
• Khanthaphixay, B., Wu, L., & Yoon, J. (2023). Microparticle-Based Detection of Viruses. Biosensors, 13(8), 820. doi:https://doi.org/10.3390/bios13080820
• Kim, S., Samanta, K., Nguyen, B. T., Mata-Robles, S., Richer, L., Yoon, J., & Gomes-Solecki, M. (2023). A portable immunosensor provides sensitive and rapid detection of Borrelia burgdorferi antigen in spiked blood. Scientific Reports, 13, 7546. doi:https://doi.org/10.1038/s41598-023-34108-9
• Liang, Y., Buchanan, B. C., Khanthaphixay, B., Zhou, A., Quirk, G., Worobey, M., & Yoon, J. (2023). Sensitive SARS-CoV-2 salivary antibody assays for clinical saline gargle samples using smartphone-based competitive particle immunoassay platforms. Biosensors and Bioelectronics, 229, 115221. doi:https://doi.org/10.1016/j.bios.2023.115221
• Liang, Y., Lee, M. H., Zhou, A., Khanthaphixay, B., Hwang, D. S., & Yoon, J. (2023). eXtreme gradient boosting-based classification of bacterial mixtures in water and milk using wireless microscopic imaging of quorum sensing peptide-conjugated particles. Biosensors and Bioelectronics, 227, 115144. doi:https://doi.org/10.1016/j.bios.2023.115144
• Reynolds, J., Loeffler, R. S., Leigh, P. J., Lopez, H. A., & Yoon, J. (2023). Recent Uses of Paper Microfluidics in Isothermal Nucleic Acid Amplification Tests. Biosensors, 13(9), 885. doi:https://doi.org/10.3390/bios13090885
• Akarapipad, P., Kaarj, K., Breshears, L. E., Sosnowski, K., Baker, J., Nguyen, B. T., Eades, C., Uhrlaub, J. L., Quirk, G., Nikolich-Zugich, J., Worobey, M., & Yoon, J. (2022). Smartphone-based sensitive detection of SARS-CoV-2 from saline gargle samples via flow profile analysis on a paper microfluidic chip. Biosensors and Bioelectronics, 207, 114192. doi:https://doi.org/10.1016/j.bios.2022.114192
• Breshears, L. E., Nguyen, B. T., Akarapipad, P., Sosnowski, K., Kaarj, K., Quirk, G., Uhrlaub, J. L., Nikolich-Zugich, J., Worobey, M., & Yoon, J. (2022). Sensitive, smartphone-based SARS-CoV-2 detection from clinical saline gargle samples. PNAS Nexus, pgac028. doi:https://doi.org/10.1093/pnasnexus/pgac028
• Breshears, L. E., Nguyen, B. T., Mata-Robles, S., Wu, L., & Yoon, J. (2022). Biosensor Detection of Airborne Respiratory Viruses Such As SARS-CoV-2. SLAS Technology, 27, 4-17. doi:https://doi.org/10.1016/j.slast.2021.12.004
• Buchanan, B. C., & Yoon, J. (2022). Microscopic Imaging Methods for Organ-on-a-Chip Platforms. Micromachines, 13, 328. doi:https://doi.org/10.3390/mi13020328
• Buchanan, B. C., Safavinia, B., Wu, L., & Yoon, J. (2022). Smartphone-based autofluorescence imaging to detect bacterial species on laboratory surfaces. Analyst, 147, 2980-2987. doi:https://doi.org/10.1039/D2AN00358A
• Kim, S., Akarapipad, P., Nguyen, B. T., Breshears, L. E., Sosnowski, K., Baker, J., Uhrlaub, J. L., Nikolich-Zugich, J., & Yoon, J. (2022). Direct Capture and Smartphone Quantification of Airborne SARS-CoV-2 on a Paper Microfluidic Chip. Biosensors and Bioelectronics, 200, 113912. doi:https://doi.org/10.1016/j.bios.2021.113912

Proceedings Publications

• Yoon, J., Breshears, L. E., Mata-Robles, S., & Reynolds, K. A. (2022). Flow rate profile based PFAS detection on smartphone- and paper-based microfluidics. In 2022 IEEE Research and Applications of Photonics in Defense Conference (RAPID), Miramar Beach, FL, USA, doi:10.1109/RAPID54472.2022.9911269.
• Chung, S., Breshears, L. E., Cho, S., Reynolds, K. A., & Yoon, J. (2017, Jul.). Rapid and Reliable Norovirus Assay at pg/mL Level Using Smartphone-Based Fluorescence Microscope and a Microfluidic Paper Analytic Device. In ASABE Annual International Meeting, 2017, 1701234.
• McCracken, K. E., Tat, T., Paz, V., Reynolds, K. A., & Yoon, J. (2017, Jul.). Immunoagglutinated Particle Rheology Sensing on a Microfluidic Paper-Based Analytical Device for Pathogen Detection. In ASABE Annual International Meeting, 2017, 1701190.
• Yoon, J. (2015, May-June). [Invited talk] Smartphone biosensors and organ-on-a-chip. In In Vitro Cellular & Developmental Biology, 51, S6-S7.
• Angus, S. V., Cho, S., Harshman, D. K., & Yoon, J. (2014, Oct). Quantitative, surface heated, droplet polymerase chain reaction for detecting pathogens. In The 18th International Conference on Miniaturized Systems for Chemistry and Life Sciences (MicroTAS 2014), 1452-1454.
• Baynes, C., Park, T. S., & Yoon, J. (2014, May). Enhanced fluorescent light scatter detection of cancer biomarkers using paper microfluidics. In Biosensors 2014: World Congress on Biosensors.
• Harshman, D. K., Reyes, R., & Yoon, J. (2014, Oct). Rapid molecular diagnosis of infective endocarditis: developing uREx Dx. In The 18th International Conference on Miniaturized Systems for Chemistry and Life Sciences (MicroTAS 2014), 1051-1053.
• Nicolini, A. M., & Yoon, J. (2014, Oct). Pro-adhesive extracellular matrix mimic for use in organ-on-a-chip. In The 18th International Conference on Miniaturized Systems for Chemistry and Life Sciences (MicroTAS 2014), 760-762.
• Nicolini, A. M., Cohn, C. M., Gamboa, J. R., Slepian, M. J., Wu, X., & Yoon, J. (2014, Apr). Fabrication of a pro-adhesive surface using electrospun PCL nanofibers interspersed with peptide conjugated polystyrene particles. In IEEE-NEMS 2014.
• Nicolini, A. M., Fronczek, C. F., & Yoon, J. (2014, May). Rapid, single-step, droplet-based bacterial assay platform on a nanofibrous substrate. In Biosensors 2014: World Congress on Biosensors.
• Park, T. S., Baynes, C., & Yoon, J. (2014, May). Paper microfluidics for red wine tasting. In Biosensors 2014: World Congress on Biosensors.
• Park, T. S., Baynes, C., Cho, S., & Yoon, J. (2014, Apr). Paper Microfluidics for Red Wine Tasting. In IEEE-NEMS 2014.
• Fronczek, C. F., Park, T. S., & Yoon, J. (2013, Oct). Paper Microfluidic Extraction of Bacterial and Viral Nucleic Acid from Field and Clinical Samples towards a Direct MicroTAS Apparatus. In The 17th International Conference on Miniaturized Systems for Chemistry and Life Sciences (MicroTAS 2013), 1114-1116.
• Harshman, D. K., Reyes, R., & Yoon, J. (2013, Oct). Direct Detection of Plasmid-Mediated Antibiotic Resistance in Bloodstream Infection by PCR Using Wire-Guided Droplet Manipulation (WDM). In The 17th International Conference on Miniaturized Systems for Chemistry and Life Sciences (MicroTAS 2013), 470-472.
• Park, T. S., Harshman, D. K., Fronczek, C. F., & Yoon, J. (2013, Oct). Smartphone Detection of Escherichia coli from Wastewater Utilizing Paper Microfluidics. In The 17th International Conference on Miniaturized Systems for Chemistry and Life Sciences (MicroTAS 2013), 1347-1349.

Poster Presentations

• Yoon, J. (2015, Jul). Mobile paper-based water quality monitoring via smartphones. ASABE Annual International Meeting. New Orleans, LA: ASABE.
• Park, T. S., Baynes, C., & Yoon, J. (2014, Mar). Paper Microfluidics for Red Wine Tasting. Annual Meeting of IBE. Lexington, KY: IBE.
• Angus, S. V., & Yoon, J. (2012, Oct). Field-Deployable and Near-Real-Time Microfluidic Biosensor with Mie Scatter Detection for Single-Oocyst-Level Detection of Cryptosporidium parvum from Field Water Samples. Food Safety Conference. Tucson, AZ: University of Arizona Food Safety Consortium.
• Fronczek, C. F., & Yoon, J. (2012, Oct). Single-Pipetting Microfluidic Assay Device for Rapid Detection of Salmonella from Poultry Package. Food Safety Conference. Tucson, AZ: University of Arizona Food Safety Consortium.
• Gamboa, J. R., Yoon, J., Smith, R. G., & Slepian, M. J. (2012, Mar). Evaluation of the performance of a left ventricular assist device in a novel in vitro heart failure model. Annual Meeting of IBE. Indianapolis, IN.
• Harshman, D. K., & Yoon, J. (2012, Oct). Device for Near-Instant Diagnosis of Bacterial Infection by Convective Droplet Thermocycling and 16s rRNA Hypervariable Region Probes. Food Safety Conference. Tucson, AZ: University of Arizona Food Safety Consortium.
• McCracken, K. E., Tran, P. L., Slepian, M. J., & Yoon, J. (2012, Mar). Nanoscale patterning under shear stress for guided endothelial cell growth. Annual Meeting of IBE. Indianapolis, IN.
• Park, T. S., & Yoon, J. (2012, Oct). Paper Microfluidic Detection of Salmonella Using a Smart Phone. Food Safety Conference. Tucson, AZ: University of Arizona Food Safety Consortium.
• Fronczek, C. F., & Yoon, J. (2011, Nov). Lab-on-a-chip Optical Immunoassay for Rapid Detection of Salmonella in Poultry. Food Safety Retreat. Tucson, AZ: University of Arizona Food Safety Consortium.
• Kwon, H., & Yoon, J. (2011, Nov). Development of a Handheld Optofluidic Immunosensor to Track the Transportation and Distribution of Respiratory Viruses in Animal and Human Environment. Food Safety Retreat. Tucson, AZ: University of Arizona Food Safety Consortium.
• Liang, P., & Yoon, J. (2011, Nov). Subsurface Bacterial Transport for Crop and Aquifer Contamination with Handheld Lab-on-a-chip Device. Food Safety Retreat. Tucson, AZ: University of Arizona Food Safety Consortium.
• Tran, P. L., & Yoon, J. (2011, Nov). Nanowell-trapped Charged Ligand-bearing Nanoparticles Surfaces - a Novel Method of Enhancing Flow Resistant Cell Adhesion. UA College of Medicine Frontiers in Biomedical Research Poster Forum. Tucson, AZ.
• You, D. J., & Yoon, J. (2011, Nov). Wire-guided Droplet Manipulations for PCR Detection of Food-borne Pathogens. Food Safety Retreat. Tucson, AZ: University of Arizona Food Safety Consortium.

Presentations

• Breshears, L. E., Mata Robles, S., Reynolds, K. A., & Yoon, J. (2021, Aug.). Flow rate profile based PFOA detection on paper-based microfluidics using competitive interactions with albumin and nitrocellulose. ACS Fall 2021 National Meeting & Exposition. Atlanta, GA: American Chemical Society (ACS).
• Day, A. S., Ulep, T., Budiman, E., Safavinia, B., & Yoon, J. (2021, July). Emulsion nucleic acid amplification for bacterial identification via angle-dependent light scatter analysis. 31st Anniversary World Congress on Biosensors. Online: Elsevier.
• Day, A. S., Ulep, T., Safavinia, B., Hertenstein, T., Budiman, E., Dieckhaus, L., & Yoon, J. (2021, Apr.). Emulsion-based Isothermal Nucleic Acid Amplification for Rapid SARS-CoV-2 Detection via Angle-dependent Light Scatter Analysis. 2021 Annual Conference of the Institute of Biological Engineering. Online: Institute of Biological Engineering (IBE).
• Kaarj, K., Akarapipad, P., Breshears, L. E., Sosnowski, K., Nguyen, B. T., Baker, J., Worobey, M., & Yoon, J. (2021, July). Rapid and sensitive detection of SARS-CoV-2 from human clinical samples using flow-based smartphone analysis on paper microfluidic chip. 31st Anniversary World Congress on Biosensors. Online: Elsevier.
• Kim, S., Lee, M., Wiwasuku, T., Day, A. S., Youngme, S., Hwang, D. S., & Yoon, J. (2021, Apr.). Taste sensor inspired peptide-based bacterial identification on smartphone-based paper microfluidic device. 2021 Annual Conference of the Institute of Biological Engineering. Online: Institute of Biological Engineering (IBE).
• Sosnowski, K., Bills, M. V., Loh, A., Nguyen, B. T., Yim, U. H., & Yoon, J. (2021, July). Raspberry Pi based, UV-fluorescent spectrophotometer device for the analysis of oil types obtained from oil spills. 31st Anniversary World Congress on Biosensors. Online: Elsevier.
• Sosnowski, K., Loh, A., Kim, T. J., Shir, H., Zubler, A. V., Ha, S. Y., Kim, U. H., & Yoon, J. (2021, Apr.). Raspberry Pi based, UV-fluorescent spectrophotometer device for the analysis of oil types obtained from oil spills. 2021 Annual Conference of the Institute of Biological Engineering. Online: Institute of Biological Engineering (IBE).
• Yoon, J. (2021, Feb.). IoT Biosensors for Agricultural, Food, Environmental & Public Health Applications. Graduate Seminar, Department of Biosystems Engineering, The University of Arizona. Online: University of Arizona.
• Yoon, J. (2021, June). Direct Detection of COVID-19 and Other Respiratory Viruses from Air and Wastewater. Department of Mechanical Engineering, Sogang University. Seoul, South Korea: Sogang University.
• Yoon, J. (2021, June). Direct Detection of COVID-19 and Other Respiratory Viruses from Air and Wastewater. Division of Integrative Biosciences & Biotechnology, Pohang University of Science and Technology (POSTECH). Pohang, South Korea: Pohang University of Science and Technology (POSTECH).
• Yoon, J. (2021, June). Direct Detection of COVID-19 and Other Respiratory Viruses from Air and Wastewater. Korea Institute of Ocean Science and Technology (KIOST). Geoje, South Korea: Korea Institute of Ocean Science and Technology (KIOST).
• Yoon, J. (2021, Mar.). Smartphone-based biosensors for medical diagnostics and public health applications. Planetary Protection Center of Excellence, Jet Propulsion Laboratory (JPL). Online: Jet Propulsion Laboratory (JPL).
• Yoon, J. (2021, Nov.). Smartphone Based Biosensors. COE Faculty Lecture Series. Online: University of Arizona.
• Yoon, J. (2020, Apr.). IoT Biosensors for Agricultural, Food, Environmental & Public Health Applications. USDA-ARS Western Regional Research Center. Albany, CA: USDA-ARS.
• Bills, M. V., & Yoon, J. (2019, Oct.). Label-Free, Light Scatter Detection of Colorectal Carcinoma Using an Angular Photodiode Array. BMES Annual Meeting. Philadelphia, PA: BMES.